| Sp | Pkt | Tore | Diff | g | u | v | ||
|---|---|---|---|---|---|---|---|---|
| 1. | SpVgg Greuther Fürth | 34 | 70 | 73:27 | 46 | 20 | 10 | 4 |
| 2. | Eintracht Frankfurt | 34 | 68 | 76:33 | 43 | 20 | 8 | 6 |
| 3. | Fortuna Düsseldorf | 34 | 62 | 64:35 | 29 | 16 | 14 | 4 |
| 4. | FC St. Pauli | 34 | 62 | 59:34 | 25 | 18 | 8 | 8 |
| 5. | SC Paderborn 07 | 34 | 61 | 51:42 | 9 | 17 | 10 | 7 |
| 6. | TSV 1860 München | 34 | 57 | 62:46 | 16 | 17 | 6 | 11 |
| 7. | 1. FC Union Berlin | 34 | 48 | 55:58 | -3 | 14 | 6 | 14 |
| 8. | Eintracht Braunschweig | 34 | 45 | 37:35 | 2 | 10 | 15 | 9 |
| 9. | Dynamo Dresden | 34 | 45 | 50:52 | -2 | 12 | 9 | 13 |
| 10. | MSV Duisburg | 34 | 39 | 42:47 | -5 | 10 | 9 | 15 |
| 11. | VfL Bochum | 34 | 37 | 41:55 | -14 | 10 | 7 | 17 |
| 12. | FC Ingolstadt | 34 | 37 | 43:58 | -15 | 8 | 13 | 13 |
| 13. | FSV Frankfurt | 34 | 35 | 43:59 | -16 | 7 | 14 | 13 |
| 14. | Energie Cottbus | 34 | 35 | 30:49 | -19 | 8 | 11 | 15 |
| 15. | Erzgebirge Aue | 34 | 35 | 31:55 | -24 | 8 | 11 | 15 |
| 16. | Karlsruher SC | 34 | 33 | 34:60 | -26 | 9 | 6 | 19 |
| 17. | Alemannia Aachen | 34 | 31 | 30:47 | -17 | 6 | 13 | 15 |
| 18. | FC Hansa Rostock | 34 | 27 | 34:63 | -29 | 5 | 12 | 17 |